Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851596.1_cds_XP_016511551.1_24280
CDS Infomation

[gene=LOC107828700] [db_xref=GeneID:107828700] [protein=vicilin-like seed storage protein At2g18540] [protein_id=XP_016511551.1] [location=complement(join(24601..25124,25216..25978,27385..27468))] [gbkey=CDS]
Sequence

ATGTCTCGGTGCTTCCCATACCCACCACCTGGCTATTCGCTGAATACAGCAGCCAATAAT
GAAGCCTTGATCGAATCGATTAAGCTCCAAAGGGAGAGGGAGATAGCTAAAGCAGAAAAG
AAGAAGGAGAAGAAGAGGGAAAAGAAAGAAAAGAGAAGAGAAGAGAAGAAGGCAAAGAAG
GAGTCAAGTAATCCTGGATTTGACAAAGCCACTCATGAGTCCAAAGGAATGTACTTGTTT
AAATGTCTAGAAGACGAAGCTGAACAGTTGGAGAGGGAAAAGAAAGAAAAGAAACAGAAG
AGAAGAGAAGAGAAGAAGGCAAAGAAGGAGTCAAGTAATCCTGGATTTGACAAAGCCACT
CATGAGTCCAAAGGAATGTACTTGTTTAAATGTCTAGAAGACGAAGCTGAACAGTTGGAG
AGGGAAAAGAAAGAAAAGAAACAGAAGAGAAGAGAAGAGAAGAAGGCAAAGAAGGAGTCA
AGTAATCCTGGATTTGACAAAGCCACTCATGAGTCCAAAGGAATGTACTTGTTTAAATGT
CTAGAAGACGAAGCTGAACAGTTGGAGAGGGAAAAGAAAGAAAAGAAACAGAAGAGAAGA
GAAGAGAAGAAGGCAAAGAAGGAGTCAAGTAATCCTGGATTTGACAAAGCCACTCATGAG
TCCAAAGGAATGTACTTGTTTAAATGTCTAGAAGACGAAGCTGAACAGTTGGAGAGGAGC
AATCTCACTGAGGAACATGGACAGGCTGTGTGCTCACAGAATTCCAGCTGCTCATCTGAC
AGCACCCAGAATAGCAATAAAAGGAAGAGGCCTGCCTCACCTTCACATGGCAACATACAG
GCACACGGTAGCATTATCCGCATTCGGTTGTCTAAAAAGGATGGGCAAGGTAAGACATCA
ACTGCCAAGGAGAAGCAGTTGCGAAAACCAGCCCAAAAAGATGTAGAAGTTACAGTCAGG
ACAAGTGTAGAGAGAGCCAATCCTTTGCTGAAAGCAACCAACAATCAAGGTTGTCCGTCC
CCATCAGTTTTAGAGCCAAGTCCATCCACGTCTGGGTGGAGAGACTGTGTTGCTGTAGAC
AAGGCGGCAACTGCATCATGCTCCAAAGCGCATGAGAACAGCATAGAATTTCAGTACAGG
AATTTGATAGAGAACTGGCTTCCACCAAGTCTTCAAACTGAGCATCTTGACGTTGACGAT
GAAGCATGGCTGTTTCAAAGAAAACCTAAGCATACTCGAGTTGGAGAAAAAAGTGCAGTC
AGCAAAGAAGTCAGCAATGATTCAACATGTGGAAGCTCTGCATTATGGCCACGGGCGCAA
TACATTCATGATGCTGAGTTGTATGCATTGCCCTTCACAGTTCCCTTTTGA

Peptide Sequence

PEP ID

XP_016511551.1
PEP Infomation

PREDICTED: vicilin-like seed storage protein At2g18540 [Nicotiana tabacum]
Sequence

MSRCFPYPPPGYSLNTAANNEALIESIKLQREREIAKAEKKKEKKREKKEKRREEKKAKK
ESSNPGFDKATHESKGMYLFKCLEDEAEQLEREKKEKKQKRREEKKAKKESSNPGFDKAT
HESKGMYLFKCLEDEAEQLEREKKEKKQKRREEKKAKKESSNPGFDKATHESKGMYLFKC
LEDEAEQLEREKKEKKQKRREEKKAKKESSNPGFDKATHESKGMYLFKCLEDEAEQLERS
NLTEEHGQAVCSQNSSCSSDSTQNSNKRKRPASPSHGNIQAHGSIIRIRLSKKDGQGKTS
TAKEKQLRKPAQKDVEVTVRTSVERANPLLKATNNQGCPSPSVLEPSPSTSGWRDCVAVD
KAATASCSKAHENSIEFQYRNLIENWLPPSLQTEHLDVDDEAWLFQRKPKHTRVGEKSAV
SKEVSNDSTCGSSALWPRAQYIHDAELYALPFTVPF

Transcript Sequence

Gene sequence data has not been registered.